Here is the collection of my tweeprints in this "thread of threads", including #bioimageanalysis papers, key image analysis tricks, and cute plant specimens viewed in 2D to 3D+t, giving new insights into plant biology.
Enjoy!
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Enjoy!
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Let's start with Fijiyama! Open-source plugin for 2D to 3D+t image registration in Fiji:
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Tracking root architecture of large plant populations automatically with RootSystemTracker, there:
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Tracking maize shoot architecture in 3D+t with PhenoTrack3D!
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Thanks @IPSiM4 for collaboration
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